Showing posts with label NMR. Show all posts
Showing posts with label NMR. Show all posts

Thursday, July 5, 2012

Elemental Fluorine

Fluorine, the most electronegative element, is extremely chemically reactive. Fluorine chemically combines with every other element in the Periodic Table, except helium and neon, to form fluorides, and these reactions are often sudden or explosive. For this reason, Chemists didn't believe that it could be found in nature in its elemental form, they thought it would only ever be found in nature in ionic compounds such as in the mineral fluorite or fluorspar (CaF2).
Chemists have now used 19F NMR spectroscopy to identify the presence of elemental fluorine in "stinking fluorspar" (antozonite, stinkspat, stinkfluss, stinkstein, fetid fluorite). As the name suggests, stinking fluorspar has an unpleasant, pungent odour when crushed.

For 200 years, scientists have tried to establish the cause of this unpleasant odour. Suggestions have included iodine and ozone, even sulfur, but Chemists doubted that elemental fluorine could be the cause of the odour. The elemental fluorine in stinking fluorspar is produced when the tiny amounts of uranium existing in the mineral emit ionizing radiation which splits the fluorite into calcium and element fluorine.

Reference
1.Jörn Schmedt auf der Günne, Martin Mangstl, Florian Kraus. Occurrence of Difluorine F2 in Nature-In Situ Proof and Quantification by NMR Spectroscopy. Angewandte Chemie International Edition, 2012; DOI: 10.1002/anie.201203515


Further Reading
Interactive Periodic Table
Trends in Group 17 (Halogens)
Electronegativity
Electron Configuration
Writing Ionic Formula
Name and Formula of Covalent Compounds
Balancing Chemical Equations

Suggested Study Questions
  1. Give the symbol for each of the following elements:
    • fluorine
    • helium
    • neon
    • calcium
    • iodine
    • oxygen
    • sulfur
    • uranium
  2. Explain what is meant by the term electronegative.
  3. Give the electron configuration for fluorine in
    • simple (shell) notation
    • sub-shell notation
  4. Give the chemical formula for elemental fluorine.
  5. Explain why elemental fluorine is expected to exist as a covalently bonded molecule.
  6. Give the formula for each of the following fluorides:
    • calcium fluoride
    • sodium fluoride
    • lithium fluoride
    • magnesium fluoride
    • silver fluoride
    • iron(II) fluoride
    • tin(IV) fluoride
    • gold(III) fluoride
    • xenon difluoride
  7. Write a balanced chemical equation to describe the reaction in which calcium fluoride in stinking fluorspar is split into elemental calcium and elemental fluorine.
  8. Write balanced chemical equations for the production of the fluoride in each of the following reactions
    • sodium metal and fluorine
    • calcium metal and fluorine
    • silver metal and fluorine
    • iron metal and fluorine
    • xeonon gas and fluorine
    • hydrogen gas and fluorine

Monday, May 23, 2011

NMR Without Magnets

Nuclear Magnetic Resonance (NMR) is an important tool in analyzing the structure of organic compounds, and, its relative, Magnetic Resonance Imaging (MRI) is used in medical diagnosis.

Nuclear Magnetic Resonance (NMR) depends on the fact that many atomic nucleii possess spin and their own dipolar magnetic fields. During conventional NMR spectroscopy these nuclei are lined by a strong external magnetic field, then knocked off axis by a burst of radio waves. The rate at which each kind of nucleus then wobbles, or precesses, is unique and identifies the element. For example, a hydrogen-1 nucleus (a lone proton) precesses four times faster than a carbon-13 nucleus (6 protons and 7 neutrons).

Being able to detect these signals depends first of all on being able to detect net spin. If the sample were to have as many spin-up nuclei as spin-down nuclei it would have zero polarization, and the signals would cancel out. But since the spin-up orientation requires slightly less energy, a population of atomic nuclei usually has a slight excess of spin ups, if only by a few in a million.

The lines in a typical NMR spectrum reveal more than just different elements. Electrons near precessing nuclei alter their precession frequencies and cause a "chemical shift", moving the signal or splitting it into separate lines in the NMR spectrum. This is the principal goal of conventional NMR, because chemical shifts point to particular chemical species; for example, even when two hydrocarbons contain the same number of hydrogen, carbon, or other atoms, their signatures differ markedly according to how the atoms are arranged. But without a strong magnetic field, chemical shifts are insignificant.

The down-side is that NMR relies on huge, very low-temperature, superconducting magnets so it is an expensive and non-portable tool. Scientists at Berkeley Lab and UC Berkeley have shown that chemical analysis with NMR is practical without using any magnets at all.

Firstly the scientists have increased the net spin orientation via hyperpolarization which increases the proportion of parahydrogen (in which the proton in each hydrogen nucleus spins in the opposite direction resulting in spin 0) in relation to orthohydrogen (in which the proton in each hydrogen nucleus spins in the same direction resulting in spin 1).

Second, the scientists use optical-atomic magnetometers instead of the huge superconducting magnets used in conventional NMR. Optical-atomic magnetometers measure whole atoms, not just nuclei. An external magnetic field is measured by measuring the spin of the atoms inside the magnetometer's own vapor cell, typically a thin gas of an alkali metal such as potassium or rubidium. Their spin is influenced by polarizing the atoms with laser light; if there's even a weak external field, they begin to precess. A second laser beam probes how much they're precessing and thus just how strong the external field is.

Third, the scientists use J-coupling, instead of chemical shift, for the chemical analysis because you cannot detect chemical shift in a zero field. Discovered in 1950 by the NMR pioneer Erwin Hahn and his graduate student, Donald Maxwell, J-coupling provides an interaction pathway between two protons (or other nuclei with spin), which is mediated by their associated electrons. The signature frequencies of these interactions, appearing in the NMR spectrum, can be used to determine the angle between chemical bonds and distances between the nuclei. You can even tell how many bonds separate the two spins.

Experiments to date have been performed on molecules that are easily hydrogenated and therefore easily hyperpolarized. Beginning with styrene, a simple hydrocarbon, J-coupling has been measured for a series of hydrocarbon derivatives including hexane and hexene, phenylpropene, and dimethyl maleate, important constituents of plastics, petroleum products, even perfumes.

Reference
T. Theis, P. Ganssle, G. Kervern, S. Knappe, J. Kitching, M. P. Ledbetter, D. Budker, A. Pines. Parahydrogen-enhanced zero-field nuclear magnetic resonance. Nature Physics, 2011; DOI: 10.1038/nphys1986


Further Reading
1H NMR Spectroscopy
Quantum Numbers
Isotopes

Study Questions
  1. For conventional 1H NMR, define the following terms:
    • chemical shift
    • magnetic coupling or spin-spin coupling
    • J-coupling
    • internal standard
  2. In conventional 1H NMR, what is the purpose of an internal standard such as TMS?

  3. In conventional 1H NMR, what does the number of signals tell you about a sample molecule?
  4. In conventional 1H NMR, what does the relative area of each signal tell you about the sample molecule?
  5. In conventional 1H NMR, what does the relative position of the signals tell you about the sample molecule?
  6. For an atom of hydrogen-1, given the possible value(s) for the spin quantum number, ms.
  7. Consider a diatomic molecule of hydrogen, H2. For each possible spin quantum number for each hydrogen atom, draw a representative diagram using ↑ to represent up-spin and ↓ to represent down-spin.
  8. For each diagram above, add the values of the spin quantum number for each nucleus in the molecule to find the net spin on the molecule.
  9. How many parahydrogen and orthohydrogen molecules did you draw?